Irvine Lab
Research Overview
The Irvine Lab investigates intercellular signaling networks and the influence of these signaling networks on cell fate, organ growth, and morphogenesis, using both Drosophila and mammalian models. We study both the molecular mechanisms of signal transduction, and the roles of signaling pathways in different developmental and physiological contexts. A current focus is on how cells perceive their mechanical environment, and how tissue mechanics influences organ growth and morphogenesis. We also investigate relationships between spatial patterning and growth in developing and regenerating organs and how patterning inputs are integrated with other factors that influence organ growth, including tissue mechanics.
Contact Information
Waksman Institute
190 Frelinghuysen Road
Irvine Lab
Piscataway, NJ 08854
United States
Selected Publications
Complete list of publications: [Google Scholar] [Pubmed]
Competition between myosin II and βH-Spectrin regulates cytoskeletal tension
Ibar, C., Chinthalapudi, K., Heissler, S.M., and Irvine, K.D. 2023. Competition between myosin II and βH-Spectrin regulates cytoskeletal tension. eLife, 12:RP84918.
Abstract
Spectrins are membrane cytoskeletal proteins generally thought to function as heterotetramers comprising two α-spectrins and two β-spectrins. They influence cell shape and Hippo signaling, but the mechanism by which they influence Hippo signaling has remained unclear. We have investigated the role and regulation of the Drosophila β-heavy spectrin (βH-spectrin, encoded by the karst gene) in wing imaginal discs. Our results establish that βH-spectrin regulates Hippo signaling through the Jub biomechanical pathway due to its influence on cytoskeletal tension. While we find that α-spectrin also regulates Hippo signaling through Jub, unexpectedly, we find that βH-spectrin localizes and functions independently of α-spectrin. Instead, βH-spectrin co-localizes with and reciprocally regulates and is regulated by myosin. In vivo and in vitro experiments support a model in which βH-spectrin and myosin directly compete for binding to apical F-actin. This competition can explain the influence of βH-spectrin on cytoskeletal tension and myosin accumulation. It also provides new insight into how βH-spectrin participates in ratcheting mechanisms associated with cell shape change.
AJUBA and WTIP can compete with LIMD1 for junctional localization and LATS regulation
Kirichenko, E. and Irvine, K.D. 2022. AJUBA and WTIP can compete with LIMD1 for junctional localization and LATS regulation. microPublication Biology, 10.17912/micropub.biology.000666.
Abstract
Each of the three mammalian Ajuba family proteins, AJUBA, LIMD1 and WTIP, exhibit tension-dependent localization to adherens junctions, and can associate with Lats kinases. However, only LIMD1 has been directly demonstrated to directly regulate Lats activity in vivo. To assess the relationship of LIMD1 to AJUBA and WTIP, and the potential contributions of AJUBA and WTIP to Lats regulation, we examined the consequences of over-expressing AJUBA and WTIP in MCF10A cells. Over-expression of either AJUBA or WTIP reduced junctional localization of LIMD1, implying that these proteins can compete for binding to adherens junctions. This over-expression also reduced junctional localization of LATS1, implying that AJUBA or WTIP are unable to efficiently recruit Lats kinases to adherens junctions. This over-expression was also associated with increased YAP1 phosphorylation and decreased YAP1 nuclear localization, consistent with increased Lats kinase activity. These observations indicate that AJUBA and WTIP compete with LIMD1 for association with adherens junctions but have activities distinct from LIMD1 in Hippo pathway regulation. They further suggest that the ability of Ajuba family proteins to associate with Lats kinases in solution is not sufficient to enable regulation in vivo, and that tumor suppressor activities of AJUBA and WTIP could stem in part from competition with LIMD1 for regulation of Lats kinases at cell junctions.
Analysis of the Drosophila Ajuba LIM protein defines functions for distinct LIM domains
Rauskolb, C., Han, A., Kirichenko, E., Ibar, C. and Irvine, K.D. 2022. Analysis of the Drosophila Ajuba LIM protein defines functions for distinct LIM domains. PLoS One, 17, e0269208.
Abstract
The Ajuba LIM protein Jub mediates regulation of Hippo signaling by cytoskeletal tension through interaction with the kinase Warts and participates in feedback regulation of junctional tension through regulation of the cytohesin Steppke. To investigate how Jub interacts with and regulates its distinct partners, we investigated the ability of Jub proteins missing different combinations of its three LIM domains to rescue jub phenotypes and to interact with α-catenin, Warts and Steppke. Multiple regions of Jub contribute to its ability to bind α-catenin and to localize to adherens junctions in Drosophila wing imaginal discs. Co-immunoprecipitation experiments in cultured cells identified a specific requirement for LIM2 for binding to Warts. However, in vivo, both LIM1 and LIM2, but not LIM3, were required for regulation of wing growth, Yorkie activity, and Warts localization. Conversely, LIM2 and LIM3, but not LIM1, were required for regulation of cell shape and Steppke localization in vivo, and for maximal Steppke binding in co-immunoprecipitation experiments. These observations identify distinct functions for the different LIM domains of Jub.
The wing imaginal disc
Tripathi, B. K. and Irvine, K.D. 2022. The wing imaginal disc. Genetics, 220, iyac020
Abstract
The Drosophila wing imaginal disc is a tissue of undifferentiated cells that are precursors of the wing and most of the notum of the adult fly. The wing disc first forms during embryogenesis from a cluster of ∼30 cells located in the second thoracic segment, which invaginate to form a sac-like structure. They undergo extensive proliferation during larval stages to form a mature larval wing disc of ∼35,000 cells. During this time, distinct cell fates are assigned to different regions, and the wing disc develops a complex morphology. Finally, during pupal stages the wing disc undergoes morphogenetic processes and then differentiates to form the adult wing and notum. While the bulk of the wing disc comprises epithelial cells, it also includes neurons and glia, and is associated with tracheal cells and muscle precursor cells. The relative simplicity and accessibility of the wing disc, combined with the wealth of genetic tools available in Drosophila, have combined to make it a premier system for identifying genes and deciphering systems that play crucial roles in animal development. Studies in wing imaginal discs have made key contributions to many areas of biology, including tissue patterning, signal transduction, growth control, regeneration, planar cell polarity, morphogenesis, and tissue mechanics.
TRIP6 is required for tension at adherens junctions
Venkatramanan, S., Ibar, C. and Irvine, K.D. 2021. TRIP6 is required for tension at adherens junctions. J Cell Science, 134, jcs.247866
Abstract
Hippo signaling mediates influences of cytoskeletal tension on organ growth. TRIP6 and LIMD1 have each been identified as being required for tension-dependent inhibition of the Hippo pathway LATS kinases and their recruitment to adherens junctions, but the relationship between TRIP6 and LIMD1 was unknown. Using siRNA-mediated gene knockdown, we show that TRIP6 is required for LIMD1 localization to adherens junctions, whereas LIMD1 is not required for TRIP6 localization. TRIP6, but not LIMD1, is also required for the recruitment of vinculin and VASP to adherens junctions. Knockdown of TRIP6 or vinculin, but not of LIMD1, also influences the localization of myosin and F-actin. In TRIP6 knockdown cells, actin stress fibers are lost apically but increased basally, and there is a corresponding increase in the recruitment of vinculin and VASP to basal focal adhesions. Our observations identify a role for TRIP6 in organizing F-actin and maintaining tension at adherens junctions that could account for its influence on LIMD1 and LATS. They also suggest that focal adhesions and adherens junctions compete for key proteins needed to maintain attachments to contractile F-actin.
Integration of Hippo-YAP signaling with metabolism
Ibar, C. and Irvine, K.D. 2020. Integration of Hippo-YAP signaling with metabolism. Dev Cell, 54, p256-267.
Abstract
The Hippo-Yes-associated protein (YAP) signaling network plays a central role as an integrator of signals that control cellular proliferation and differentiation. The past several years have provided an increasing appreciation and understanding of the diverse mechanisms through which metabolites and metabolic signals influence Hippo-YAP signaling, and how Hippo-YAP signaling, in turn, controls genes that direct cellular and organismal metabolism. These connections enable Hippo-YAP signaling to coordinate organ growth and homeostasis with nutrition and metabolism. In this review, we discuss the current understanding of some of the many interconnections between Hippo-YAP signaling and metabolism and how they are affected in disease conditions.
Organization and Function of Tension-dependent Complexes at Adherens Junctions.
Rauskolb, C., Cervantes, E., Madere, F. and Irvine, K.D. 2019. J Cell Science, 132, jcs224063.
Early girl is a novel component of the Fat signaling pathway.
Misra, J.R. and Irvine, K.D. 2019. PLoS Genetics, 15, e1007955.
Oriented cell divisions are not required for Drosophila wing shape.
Zhou, Z. Alégot, H., and Irvine, K.D. 2019. Current Biology, 29, 856-864.
Recruitment of Jub by a-catenin promotes Yki activity and Drosophila wing growth.
Alégot, H., Markosian, C., Rauskolb, C. Yang, J., Kirichenko, E., Wang, Y.-C., and Irvine, K.D. 2019. J Cell Science, 132, jcs222018.
The Dynamics of Hippo Signaling during Drosophila Wing.
Pan, Y., Alégot, H., Rauskolb, C. and Irvine, K.D. 2018. Development, 145, dev165712.
Tension-dependent regulation of mammalian Hippo signaling through LIMD1.
Ibar, C., Kirichenko, E., Keepers, B., Enners, E., Fleisch K. and Irvine, K.D. 2018. J Cell Science, 131, jcs214700.
Vamana couples Fat signaling to the Hippo pathway.
Misra, J.R. and Irvine, K.D. 2016. Dev. Cell 39, 254-266. PMCID: PMC5102026
Differential growth triggers mechanical feedback that elevates Hippo signaling.
Pan, Y., Heemskerk, I., Ibar, C., Shraiman, B. I. and Irvine, K.D. 2016. Proc. Nat. Acad. Sci. USA 113, E6974-E6983 PMCID: PMC5111668
Localization of Hippo Signaling complexes and Warts activation in vivo.
Sun, S., Reddy, B.V.V.G., and Irvine, K.D. 2015. Nature Communications 6, 8402. PMCID: PMC4598633
Coordination of planar cell polarity pathways through Spiny legs.
Ambegaonkar, A.A. and Irvine, K.D. 2015. eLife 4, e09946. PMCID: PMC4764577
Cytoskeletal Tension inhibits Hippo signaling through an Ajuba-Warts complex.
Rauskolb, C., Sun, S., Sun, G., Pan, Y. and Irvine, K.D. 2014. Cell, 158, 143-156. PMCID: PMC4082802
Regulation of YAP by Mechanical Strain through Jnk and Hippo Signaling.
Codelia, V., Sun, G., and Irvine, K.D. 2014. Current Biology, 24, 2012-2017. PMCID: PMC4160395
Ajuba family proteins link JNK to Hippo signaling. Science Signaling 6, ra81.
Sun, G. and Irvine, K.D. 2013. PMCID: PMC3830546
Regulation of Hippo signaling by EGFR-MAPK signaling through Ajuba family proteins.
Reddy, B.V.V.G. and Irvine, K.D. 2013. Dev. Cell 24, 459-471. PMCID: PMC3624988
Propagation of Dachsous-Fat Planar Cell Polarity.
Ambegaonkar, A.A., Pan, G., Mani, M., Feng, Y. and Irvine, K.D. 2012. Current Biology 22, 1302-1308. PMCID: PMC3418676
Characterization of a Dchs1 mutant mouse reveals requirements for Dchs1-Fat4 signaling during mammalian development.
Mao, Y., Mulvaney, J., Zakaria, S., Yu, T., Malanga, K., Allen, S., Basson, M.A., Francis-West, P., and Irvine, K.D. 2011. Development, 138, 947-957. PMCID: PMC3035097
Modulation of Fat-Dachsous binding by the cadherin domain kinase Four-jointed.
Simon, M.A., Xu, A., Ishikawa, H.O. and Irvine, K.D. 2010. Current Biology 20, 811-817. PMCID: PMC2884055
Warts and Yorkie mediate intestinal regeneration by influencing stem cell proliferation.
Staley, B.K. and Irvine, K.D. 2010. Current Biology 20, 1580-1587. PMCID: PMC2955330
Four-jointed is a Golgi kinase that phosphorylates a subset of cadherin domains.
Ishikawa, H.O., Takeuchi, H., Haltiwanger, R.S. and Irvine, K.D. 2008. Science 321, 401-404. PMCID: PMC2562711
Delineation of a Fat tumor suppressor pathway.
Cho, E., Feng, Y., Rauskolb, C., Maitra, S., Fehon, R., and Irvine, K.D. 2006. Nature Genetics 38, 1142-1150.
Current Lab Members
Principal Investigator
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Kenneth Irvine is Principal Investigator in the Waksman Institute, Distinguished Professor in the Department of Molecular Biology and Biochemistry, and Director of the Graduate Program in Cell and Developmental Biology. He studies intercellular signaling networks and the influence of these signaling networks on cell fate, organ growth, and morphogenesis, using both Drosophila and mammalian models. A current focus in his lab is on how cells perceive their mechanical environment, and how tissue mechanics influences organ growth and morphogenesis.
Alumni
Former Research Associates
- Dr. Jyoti Misra
Former Postdoctoral Fellows
- Dr. Consuelo Ibar
Former Lab Researchers
- Kush Mansuria
Former Graduate Students
- Srividya Venkatramanan
- Zhenru Zhou
Former Undergraduate Students
- Tom Lehan
- Jessica Amoako